PDBx/mmCIF
トップ
辞書
PDBx/mmCIF 辞書をみる
現行版(Ver.5)PDBx/mmCIF
開発版PDBx/mmCIF
辞書定義言語 Ver.2
wwPDB検証レポート
他の辞書をみる
統合ハイブリッド法用拡張CIF(IHMCIF)
蛍光共鳴エネルギー移動法用拡張CIF(flrCIF)
旧版PDBx/mmCIF(Ver.4)
mmCIF辞書の原文
NMRIF/NMR-STAR
NMR交換フォーマット(NEF)
小角散乱(SAS)
DNATCO立体配座異性体分析(NDB NTC)
3次元電子顕微鏡(3DEM)
画像mmCIF
対称性
Biosync
ホモロジーモデリング(modelCIF)
文書
PDBx/mmCIFに関するよくある質問
PDBx/mmCIFユーザーガイド
書式
PDBx/mmCIF形式における巨大構造
PDBフォーマットとPDBxフォーマットとの対応
wwPDB PDBx/mmCIF作業部会
ソフトウェア
ソフトウェア情報
C++の例
Pythonの例
参考文献
ファイルの書式
辞書の構成
原子の記述方法
分子の記述方法
参考文献一覧
初期の歴史
用語集
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英語原文(wwPDB)
mmcif_pdbx.dic
カテゴリ索引
Browse:
辞書
カテゴリグループ
データカテゴリ
データアイテム
Supporting Data
- A -
カテゴリ数
13
カテゴリ一覧を表示/隠す
atom_site
atom_site_anisotrop
atom_sites
atom_sites_alt
atom_sites_alt_ens
atom_sites_alt_gen
atom_sites_footnote
atom_type
audit
audit_author
audit_conform
audit_contact_author
audit_link
- C -
カテゴリ数
31
カテゴリ一覧を表示/隠す
cell
cell_measurement
cell_measurement_refln
chem_comp
chem_comp_angle
chem_comp_atom
chem_comp_bond
chem_comp_chir
chem_comp_chir_atom
chem_comp_link
chem_comp_plane
chem_comp_plane_atom
chem_comp_tor
chem_comp_tor_value
chem_link
chem_link_angle
chem_link_bond
chem_link_chir
chem_link_chir_atom
chem_link_plane
chem_link_plane_atom
chem_link_tor
chem_link_tor_value
chemical
chemical_conn_atom
chemical_conn_bond
chemical_formula
citation
citation_author
citation_editor
computing
- D -
カテゴリ数
23
カテゴリ一覧を表示/隠す
database
database_2
database_PDB_caveat
database_PDB_matrix
database_PDB_remark
database_PDB_rev
database_PDB_rev_record
database_PDB_tvect
diffrn
diffrn_attenuator
diffrn_detector
diffrn_measurement
diffrn_orient_matrix
diffrn_orient_refln
diffrn_radiation
diffrn_radiation_wavelength
diffrn_refln
diffrn_reflns
diffrn_reflns_class
diffrn_scale_group
diffrn_source
diffrn_standard_refln
diffrn_standards
- E -
カテゴリ数
85
カテゴリ一覧を表示/隠す
em_2d_crystal_entity
em_2d_projection_selection
em_3d_crystal_entity
em_3d_fitting
em_3d_fitting_list
em_3d_reconstruction
em_admin
em_assembly
em_author_list
em_buffer
em_buffer_component
em_crystal_formation
em_ctf_correction
em_db_reference
em_db_reference_auxiliary
em_depositor_info
em_depui
em_detector
em_diffraction
em_diffraction_shell
em_diffraction_stats
em_embedding
em_entity_assembly
em_entity_assembly_molwt
em_entity_assembly_naturalsource
em_entity_assembly_recombinant
em_euler_angle_assignment
em_experiment
em_fiducial_markers
em_figure_depositor_info
em_final_classification
em_focused_ion_beam
em_fsc_curve
em_grid_pretreatment
em_helical_entity
em_high_pressure_freezing
em_image_processing
em_image_recording
em_image_scans
em_imaging
em_imaging_optics
em_interpret_figure
em_layer_lines
em_layer_lines_depositor_info
em_map
em_map_depositor_info
em_mask_depositor_info
em_obsolete
em_particle_selection
em_sample_preparation
em_sample_support
em_shadowing
em_single_particle_entity
em_software
em_specimen
em_staining
em_start_model
em_structure_factors
em_structure_factors_depositor_info
em_supersede
em_support_film
em_tomography
em_tomography_specimen
em_ultramicrotomy
em_virus_entity
em_virus_natural_host
em_virus_shell
em_vitrification
em_volume_selection
entity
entity_keywords
entity_link
entity_name_com
entity_name_sys
entity_poly
entity_poly_seq
entity_src_gen
entity_src_nat
entry
entry_link
exptl
exptl_crystal
exptl_crystal_face
exptl_crystal_grow
exptl_crystal_grow_comp
- G -
カテゴリ数
6
カテゴリ一覧を表示/隠す
geom
geom_angle
geom_bond
geom_contact
geom_hbond
geom_torsion
- J -
カテゴリ数
2
カテゴリ一覧を表示/隠す
journal
journal_index
- N -
カテゴリ数
5
カテゴリ一覧を表示/隠す
ndb_original_ndb_coordinates
ndb_struct_conf_na
ndb_struct_feature_na
ndb_struct_na_base_pair
ndb_struct_na_base_pair_step
- P -
カテゴリ数
328
カテゴリ一覧を表示/隠す
pdbx_SG_project
pdbx_atlas
pdbx_atom_site_aniso_tls
pdbx_audit
pdbx_audit_author
pdbx_audit_conform_extension
pdbx_audit_revision_category
pdbx_audit_revision_details
pdbx_audit_revision_group
pdbx_audit_revision_history
pdbx_audit_revision_item
pdbx_audit_support
pdbx_bond_distance_limits
pdbx_buffer
pdbx_buffer_components
pdbx_chem_comp_atom_edit
pdbx_chem_comp_atom_feature
pdbx_chem_comp_audit
pdbx_chem_comp_bond_edit
pdbx_chem_comp_depositor_info
pdbx_chem_comp_descriptor
pdbx_chem_comp_feature
pdbx_chem_comp_identifier
pdbx_chem_comp_import
pdbx_chem_comp_instance_depositor_info
pdbx_chem_comp_model
pdbx_chem_comp_model_atom
pdbx_chem_comp_model_audit
pdbx_chem_comp_model_bond
pdbx_chem_comp_model_descriptor
pdbx_chem_comp_model_feature
pdbx_chem_comp_model_reference
pdbx_chem_comp_nonstandard
pdbx_chem_comp_subcomponent_entity_list
pdbx_chem_comp_subcomponent_struct_conn
pdbx_chem_comp_synonyms
pdbx_chem_comp_upload_depositor_info
pdbx_columninfo
pdbx_connect
pdbx_connect_atom
pdbx_connect_modification
pdbx_connect_type
pdbx_construct
pdbx_construct_feature
pdbx_contact_author
pdbx_coord
pdbx_coordinate_model
pdbx_crystal_alignment
pdbx_data_processing_cell
pdbx_data_processing_detector
pdbx_data_processing_reflns
pdbx_data_processing_status
pdbx_database_PDB_master
pdbx_database_PDB_obs_spr
pdbx_database_message
pdbx_database_pdb_omit
pdbx_database_proc
pdbx_database_related
pdbx_database_remark
pdbx_database_status
pdbx_database_status_history
pdbx_dbref
pdbx_dcc_density
pdbx_dcc_density_corr
pdbx_dcc_geometry
pdbx_dcc_map
pdbx_dcc_mapman
pdbx_dcc_rscc_mapman
pdbx_dcc_rscc_mapman_overall
pdbx_deposit_group
pdbx_deposit_group_index
pdbx_deposition_message_file_reference
pdbx_deposition_message_info
pdbx_depui_entity_features
pdbx_depui_entity_status_flags
pdbx_depui_entry_details
pdbx_depui_status_flags
pdbx_depui_upload
pdbx_depui_validation_status_flags
pdbx_diffrn_reflns_shell
pdbx_distant_solvent_atoms
pdbx_domain
pdbx_domain_range
pdbx_drug_info
pdbx_entity_assembly
pdbx_entity_descriptor
pdbx_entity_func_bind_mode
pdbx_entity_func_enzyme
pdbx_entity_func_other
pdbx_entity_func_regulatory
pdbx_entity_func_structural
pdbx_entity_instance_feature
pdbx_entity_name
pdbx_entity_name_instance
pdbx_entity_name_taxonomy
pdbx_entity_name_taxonomy_tree
pdbx_entity_nonpoly
pdbx_entity_poly_comp_link_list
pdbx_entity_poly_domain
pdbx_entity_poly_na_nonstandard
pdbx_entity_poly_na_type
pdbx_entity_poly_protein_class
pdbx_entity_prod_protocol
pdbx_entity_src_gen_character
pdbx_entity_src_gen_chrom
pdbx_entity_src_gen_clone
pdbx_entity_src_gen_clone_ligation
pdbx_entity_src_gen_clone_recombination
pdbx_entity_src_gen_depositor_info
pdbx_entity_src_gen_express
pdbx_entity_src_gen_express_timepoint
pdbx_entity_src_gen_fract
pdbx_entity_src_gen_lysis
pdbx_entity_src_gen_prod_digest
pdbx_entity_src_gen_prod_other
pdbx_entity_src_gen_prod_other_parameter
pdbx_entity_src_gen_prod_pcr
pdbx_entity_src_gen_proteolysis
pdbx_entity_src_gen_pure
pdbx_entity_src_gen_refold
pdbx_entity_src_syn
pdbx_entry_details
pdbx_exptl_crystal_cryo_treatment
pdbx_exptl_crystal_grow_comp
pdbx_exptl_crystal_grow_sol
pdbx_exptl_pd
pdbx_family_group_index
pdbx_family_prd_audit
pdbx_feature_assembly
pdbx_feature_domain
pdbx_feature_entry
pdbx_feature_monomer
pdbx_feature_sequence_range
pdbx_helical_symmetry
pdbx_helical_symmetry_depositor_info
pdbx_hybrid
pdbx_inhibitor_info
pdbx_ion_info
pdbx_linked_entity
pdbx_linked_entity_instance_list
pdbx_linked_entity_link_list
pdbx_linked_entity_list
pdbx_missing_atom_nonpoly
pdbx_missing_atom_poly
pdbx_missing_residue_list
pdbx_molecule
pdbx_molecule_features
pdbx_molecule_features_depositor_info
pdbx_na_strand_info
pdbx_na_struct_keywds
pdbx_nmr_assigned_chem_shift_list
pdbx_nmr_chem_shift_experiment
pdbx_nmr_chem_shift_ref
pdbx_nmr_chem_shift_reference
pdbx_nmr_chem_shift_software
pdbx_nmr_computing
pdbx_nmr_constraint_file
pdbx_nmr_constraints
pdbx_nmr_details
pdbx_nmr_ensemble
pdbx_nmr_ensemble_rms
pdbx_nmr_exptl
pdbx_nmr_exptl_sample
pdbx_nmr_exptl_sample_conditions
pdbx_nmr_force_constants
pdbx_nmr_refine
pdbx_nmr_representative
pdbx_nmr_sample_details
pdbx_nmr_software
pdbx_nmr_software_task
pdbx_nmr_spectral_dim
pdbx_nmr_spectral_peak_list
pdbx_nmr_spectral_peak_software
pdbx_nmr_spectrometer
pdbx_nmr_systematic_chem_shift_offset
pdbx_nmr_upload
pdbx_nonpoly_scheme
pdbx_nonstandard_list
pdbx_pdb_compnd
pdbx_pdb_source
pdbx_phasing_MAD_set
pdbx_phasing_MAD_set_shell
pdbx_phasing_MAD_set_site
pdbx_phasing_MAD_shell
pdbx_phasing_MR
pdbx_phasing_dm
pdbx_phasing_dm_shell
pdbx_point_symmetry
pdbx_point_symmetry_depositor_info
pdbx_poly_seq_scheme
pdbx_post_process_details
pdbx_post_process_status
pdbx_prd_audit
pdbx_prerelease_seq
pdbx_protein_info
pdbx_re_refinement
pdbx_reference_entity_link
pdbx_reference_entity_list
pdbx_reference_entity_nonpoly
pdbx_reference_entity_poly
pdbx_reference_entity_poly_link
pdbx_reference_entity_poly_seq
pdbx_reference_entity_sequence
pdbx_reference_entity_src_nat
pdbx_reference_entity_subcomponents
pdbx_reference_linked_entity
pdbx_reference_linked_entity_comp_link
pdbx_reference_linked_entity_comp_list
pdbx_reference_linked_entity_link
pdbx_reference_molecule
pdbx_reference_molecule_annotation
pdbx_reference_molecule_details
pdbx_reference_molecule_family
pdbx_reference_molecule_features
pdbx_reference_molecule_list
pdbx_reference_molecule_related_structures
pdbx_reference_molecule_synonyms
pdbx_reference_publication_list
pdbx_refine
pdbx_refine_aux_file
pdbx_refine_component
pdbx_refine_ls_restr_ncs
pdbx_refine_tls
pdbx_refine_tls_group
pdbx_reflns_twin
pdbx_related_exp_data_set
pdbx_remediation_atom_site_mapping
pdbx_rmch_outlier
pdbx_rms_devs_cov_by_monomer
pdbx_rms_devs_covalent
pdbx_robot_system
pdbx_seq_map_depositor_info
pdbx_sequence_annotation
pdbx_sequence_pattern
pdbx_sequence_range
pdbx_soln_scatter
pdbx_soln_scatter_model
pdbx_solvent_atom_site_mapping
pdbx_solvent_info
pdbx_source
pdbx_stereochemistry
pdbx_struct_assembly
pdbx_struct_assembly_auth_classification
pdbx_struct_assembly_auth_evidence
pdbx_struct_assembly_auth_evidence_depositor_info
pdbx_struct_assembly_depositor_info
pdbx_struct_assembly_gen
pdbx_struct_assembly_gen_depositor_info
pdbx_struct_assembly_prop
pdbx_struct_assembly_prop_depositor_info
pdbx_struct_asym_gen
pdbx_struct_biol_func
pdbx_struct_chem_comp_diagnostics
pdbx_struct_chem_comp_feature
pdbx_struct_conn_angle
pdbx_struct_entity_inst
pdbx_struct_group_component_range
pdbx_struct_group_components
pdbx_struct_group_list
pdbx_struct_info
pdbx_struct_legacy_oper_list
pdbx_struct_link
pdbx_struct_mod_residue
pdbx_struct_msym_gen
pdbx_struct_ncs_virus_gen
pdbx_struct_oper_list
pdbx_struct_oper_list_depositor_info
pdbx_struct_pack_gen
pdbx_struct_ref_seq_deletion
pdbx_struct_ref_seq_depositor_info
pdbx_struct_ref_seq_dif_depositor_info
pdbx_struct_ref_seq_feature
pdbx_struct_ref_seq_feature_prop
pdbx_struct_ref_seq_insertion
pdbx_struct_sheet_hbond
pdbx_struct_special_symmetry
pdbx_sugar_phosphate_geometry
pdbx_summary_flags
pdbx_supporting_exp_data_set
pdbx_tableinfo
pdbx_trna_info
pdbx_unobs_or_zero_occ_atoms
pdbx_unobs_or_zero_occ_residues
pdbx_unpair
pdbx_val_angle
pdbx_val_bond
pdbx_val_chiral
pdbx_val_contact
pdbx_val_sym_contact
pdbx_validate_chiral
pdbx_validate_close_contact
pdbx_validate_main_chain_plane
pdbx_validate_peptide_omega
pdbx_validate_planes
pdbx_validate_planes_atom
pdbx_validate_polymer_linkage
pdbx_validate_rmsd_angle
pdbx_validate_rmsd_bond
pdbx_validate_symm_contact
pdbx_validate_torsion
pdbx_version
pdbx_view_category
pdbx_view_category_group
pdbx_view_item
pdbx_virtual_angle
pdbx_virtual_bond
pdbx_virtual_torsion
pdbx_xplor_file
phasing
phasing_MAD
phasing_MAD_clust
phasing_MAD_expt
phasing_MAD_ratio
phasing_MAD_set
phasing_MIR
phasing_MIR_der
phasing_MIR_der_refln
phasing_MIR_der_shell
phasing_MIR_der_site
phasing_MIR_shell
phasing_averaging
phasing_isomorphous
phasing_set
phasing_set_refln
publ
publ_author
publ_body
publ_manuscript_incl
- R -
カテゴリ数
17
カテゴリ一覧を表示/隠す
refine
refine_B_iso
refine_analyze
refine_funct_minimized
refine_hist
refine_ls_class
refine_ls_restr
refine_ls_restr_ncs
refine_ls_restr_type
refine_ls_shell
refine_occupancy
refln
refln_sys_abs
reflns
reflns_class
reflns_scale
reflns_shell
- S -
カテゴリ数
37
カテゴリ一覧を表示/隠す
software
space_group
space_group_symop
struct
struct_asym
struct_biol
struct_biol_gen
struct_biol_keywords
struct_biol_view
struct_conf
struct_conf_type
struct_conn
struct_conn_type
struct_keywords
struct_mon_details
struct_mon_nucl
struct_mon_prot
struct_mon_prot_cis
struct_ncs_dom
struct_ncs_dom_lim
struct_ncs_ens
struct_ncs_ens_gen
struct_ncs_oper
struct_ref
struct_ref_seq
struct_ref_seq_dif
struct_sheet
struct_sheet_hbond
struct_sheet_order
struct_sheet_range
struct_sheet_topology
struct_site
struct_site_gen
struct_site_keywords
struct_site_view
symmetry
symmetry_equiv
- V -
カテゴリ数
2
カテゴリ一覧を表示/隠す
valence_param
valence_ref